Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015852203.1_cds_XP_016511763.1_24470
CDS Infomation

[gene=LOC107828889] [db_xref=GeneID:107828889] [protein=premnaspirodiene oxygenase-like] [protein_id=XP_016511763.1] [location=join(159048..159950,160177..160794)] [gbkey=CDS]
Sequence

ATGGAAATGGAGCTATCTTTTCTTCTTGGTGCTTTACTTCTTTTACCCTTACTTGTCACT
AAATGGTACAAAATGTGTAATAATAGAAGAAAACTGCCTCCAGGTCCTATGAAGCTCCCA
ATTTTAGGAAACTTACACCAACTTATCGACTGGAAATCATCTGAGTTACTACCACATCGT
ACTCTCGCCAAATTAGCCTCTAAACATGGACCTCTGATGCACATGAAACTCGGCGAACGT
TCAGCCATTATTGTTTCATCACCTCAAATGGTTAGAGAAGTGATGAGAAAACATGATCTC
AATTTCTCTAATCGACCTGTGCTTTTGGTCGGAAAAGAAATGTTTTATGACCATGCTGAC
ATGGGATTTTGTAACTACGGTGATTTCTGGAGACAAATGCGCAAAATTTGTATTCAGGAA
CTCCTTAGTCATAAAAATATTCAGTTATTTTATCCCAAGATGTTTAATGAGATATCCAAT
CTTGTTAACTCAATTAAAGATTCTGCTTCTGGTTGCAGCCCAATCAACATGACTGAAACA
TTATCTTTGTATACGAATTCGGTTATTTGCAAAGCAAGTGTAGGCAGGGCCTGTAAAAAT
CAGGGCTCTTTGATTGGTATAATGAGAACAGTAGCTGGTTCAGCTGGAGTATTTGATCTT
GCCGATCTTTTTCCCTCAGTGAAGATAATTCATTTTTTGAGTGGATTAAAATACAAACTA
CGTAAAATGCACGACGAGGTTGATGTTCTTTTAGAAGAAATTATCAATGAACATGAATTC
CAGAATGGGAGTAGTAATGATGATCCCACAGAAGAAGATATAGTTGATGTTCTCCTAAGG
CTTCAAAAGAGTCAAGATTTTTCAATTCCTATCACAAGGGATAATATCAAAGCTTTAATC
ATTGACTTATTTGCAGGAGGATCTACAACTTCAGCGTCAACAATGGAATGGGCATTTTCA
GAACTAATGAAAAATCCGAAAATAATGAAAAAAGCACAGGATGAAGTAAGACAAGTTTTC
AAAGGAAAGGAAAAGGGAATTGACCAAACTGATATTCAGAAACTTAAGTACCTAAAAATG
GTAGTTAAGGAAACTGTAAGGTTTCATCCTTTAGCTCCATTATTAGCACCAAGAGAATCA
AGAGAAGAGTGTGAGATTAATGGCTATATTATACCAAAAGGCACAATGGCCCTTGTGAAT
TTTTGGGCAATTTCAAGGGATCAAAATTATTGGCAAAATCCTGAAACATTTGATCCAGAG
AGATTTAACGAAAGTCACCTTGATTTTACTGGAGCTCATTTCGAGTTTACGCCATTTGGC
ACTGGAAGAAGAATTTGCCCAGGATTATCATTTTCAATGGCAACTGTGGAGCTTAGTCTA
GCACTATTACTCTACCATTTTGATTGGAAGCTTCCCAATGGAATGAATCCAAATGAACTA
GACATGACTGAGAAATTTGGCAATGCTCTTGAAAGGAAAAACAATTTGTACTTGATTCCT
TTGCCCTATCTTCATGGCTAA

Peptide Sequence

PEP ID

XP_016511763.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like [Nicotiana tabacum]
Sequence

MEMELSFLLGALLLLPLLVTKWYKMCNNRRKLPPGPMKLPILGNLHQLIDWKSSELLPHR
TLAKLASKHGPLMHMKLGERSAIIVSSPQMVREVMRKHDLNFSNRPVLLVGKEMFYDHAD
MGFCNYGDFWRQMRKICIQELLSHKNIQLFYPKMFNEISNLVNSIKDSASGCSPINMTET
LSLYTNSVICKASVGRACKNQGSLIGIMRTVAGSAGVFDLADLFPSVKIIHFLSGLKYKL
RKMHDEVDVLLEEIINEHEFQNGSSNDDPTEEDIVDVLLRLQKSQDFSIPITRDNIKALI
IDLFAGGSTTSASTMEWAFSELMKNPKIMKKAQDEVRQVFKGKEKGIDQTDIQKLKYLKM
VVKETVRFHPLAPLLAPRESREECEINGYIIPKGTMALVNFWAISRDQNYWQNPETFDPE
RFNESHLDFTGAHFEFTPFGTGRRICPGLSFSMATVELSLALLLYHFDWKLPNGMNPNEL
DMTEKFGNALERKNNLYLIPLPYLHG

Transcript Sequence

Gene sequence data has not been registered.